2022

Simkovičová, Karolína; Qadir, Muhammad I.; Žilková, Naděžda; Olszówka, Joanna E.; Sialini, Pavel; Kvítek, Libor; Vajda, Štefan: Hydrogenation of CO2 on Nanostructured Cu/FeOx Catalysts: The Effect of Morphology and Cu Load on Selectivity. In: Catalysts , vol. 12, iss. 5, no. 516, 2022. (DOI)

Murtaja, Yousef; Lapčík, Lubomír Jr.; Lapčíková, Barbora; Gautam, Shweta; Vašina, Martin; Spanhel, Lubomír; Vlček, Jakub: Intelligent high-tech coating of natural biopolymer layers.. In: Adv. Colloid Interface Sci., vol. ASAP, 2022. (DOI)

Kostelanská, Klára; Prudilová, Bláhová Barbora; Holešová, Sylva; Vlček, Jakub; Vetchý, David; Gajdziok, Jan: Comparative Study of Powder Carriers Physical and Structural Properties.. 2022. (DOI)

Hochvaldová, Lucie; Panáček, David; Válková, Lucie; Prucek, Robert; Kohlová, Věra; Večeřová, Renata; Kolář, Milan; Kvítek, Libor; Panáček, Aleš: Restoration of antibacterial activity of inactive antibiotics via combined treatment with a cyanographene/Ag nanohybrid. In: Sci. Rep., vol. 12, no. 5222 , 2022. (DOI)

Hochvaldová, Lucie; Večeřová, Renata; Kolář, Milan; Prucek, Robert; Kvítek, Libor; Lapčík, Lubomír; Panáček, Aleš: Antibacterial nanomaterials: Upcoming hope to overcome antibiotic resistance crisis. In: Nanotechnol. Rev., vol. 11, iss. 1, pp. 1115–1142, 2022. (DOI)

Lawson, Roland; Čechová, Petra; Zarrouk, Elies; Javellaud, James; Bazgier, Václav; Otyepka, Michal; Trouillas, Patrick; Picard, Nicolas; Marquet, Pierre; Saint-Marcoux, Franck; El Balkhi, Souleiman: Metabolic interactions of benzodiazepines with oxycodone ex vivo and toxicity depending on usage patterns in an animal model. In: Br. J. Pharmacol., vol. ASAP, 2022. (DOI)

Lapčíková, Barbora; Lapčík, Lubomír; Salek, Richardos; Tomáš Lorencová Valenta, Eva Vašina: Physical characterization of the milk chocolate using whey powder. In: LWT Food Sci. Technol., vol. 154, pp. 112669, 2022. (DOI)

Lapčík, Lubomír; Vašina, Martin; Lapčíková, Barbora; Murtaja, Yousef: Effect of Conditioning on PU Foam Matrix Materials Properties.. In: Materials, vol. 15, no. 1, pp. 195, 2022. (DOI)

Murtaja, Yousef; Lapčík, Lubomír; Sepetcioglu, Harun; Vlček, Jakub; Lapčíková, Barbora; Ovsík, Martin; Staněk, Michal: Enhancement of the mechanical properties of HDPE mineral nanocomposites by filler particles modulation of the matrix plastic/elastic behavior.. In: Nanotechnol. Rev., vol. 11, no. 1, pp. 312-320, 2022. (DOI)

2021

Lo, Rabindranath; Manna, Debashree; Lamanec, Maximilian; Wang, Weizhou; Bakandritsos, Aristides; Dračinský, Martin; Zbořil, Radek; Nachtigallová, Dana; Hobza, Pavel: Addition Reaction between Piperidine and C60 to Form 1,4-Disubstituted C60 Proceeds through van der Waals and Dative Bond Complexes: Theoretical and Experimental Study.. In: J. Am. Chem. Soc., vol. ASAP, 2021. (DOI)

Vařeková, Ivana Hutařová; Hutař, Jan; Midlik, Adam; Horský, Vladimír; Hladká, Eva; Svobodová, Radka; Berka, Karel: 2DProts: Database of Family-Wide Protein Secondary Structure Diagrams. In: Bioinformatics, pp. btab505, 2021. (DOI)

Mallada, Benjamin; Blonski, Piotr; Langer, Rostislav; Jelínek, Pavel; Otyepka, Michal; Torre, Bruno: On-Surface Synthesis of One-Dimensional Coordination Polymers with Tailored Magnetic Anisotropy.. In: ACS Appl. Mater. Interfaces, vol. 13, no. 27, pp. 32393–32401, 2021. (DOI)

Schindler, Ondřej; Raček, Tomáš; Marsavelsi, Aleksandra; Koča, Jaroslav; Berka, Karel; Svobodová, Radka: Optimized SQE atomic charges for peptides accessible via a web application. In: J Cheminf, vol. 13, no. 12, pp. 45, 2021. (DOI)

Janeček, Michal; Kührová, Petra; Mlýnský, Vojtěch; Otyepka, Michal; Šponer, Jiří; Banáš, Pavel: W-RESP: Well-Restrained Electrostatic Potential-Derived Charges. Revisiting the Charge Derivation Model.. In: J. Chem. Theory Comput., vol. 17, no. 6, pp. 3495–3509, 2021. (DOI)

Midlik, Adam; Navrátilová, Veronika; Moturu, Taraka Ramji; Koča, Jaroslav; Svobodová, Radka; Berka, Karel: Uncovering of Cytochrome P450 Anatomy by SecStrAnnotator. In: Scientific Reports, vol. 11, no. 1, pp. 12345, 2021. (DOI)

Panáček, David; Hochvaldová, Lucie; Bakandritsos, Aristides; Malina, Tomáš; Langer, Michal; Belza, Jan; Martincová, Jana; Večeřová, Renata; Lazar, Petr; Poláková, Kateřina; Kolařík, Jan; Válková, Lucie; Kolář, Milan; Otyepka, Michal; Panáček, Aleš; Zbořil, Radek: Silver Covalently Bound to Cyanographene Overcomes Bacterial Resistance to Silver Nanoparticles and Antibiotics.. In: Adv. Sci., vol. 8, no. 12, pp. 2003090, 2021. (DOI)

Sehnal, David; Bittrich, Sebastian; Deshpande, Mandar; Svobodová, Radka; Berka, Karel; Bazgier, Václav; Velankar, Sameer; Burley, Stephen K; Koča, Jaroslav; Rose, Alexander S: Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures.. In: Nucleic Acids Res., vol. 49, no. W1, pp. W431-W437, 2021. (DOI)

Kiss, Márton A.; Peřina, Miroslav; Bazgier, Václav; May, Nóra V; Baji, Ádám; Jorda, Radek; Frank, Éva: Synthesis of dihydrotestosterone derivatives modified in the A-ring with (hetero)arylidene, pyrazolo[1,5-a]pyrimidine and triazolo[1,5-a]pyrimidine moieties and their targeting of the androgen receptor in prostate cancer.. In: J. Steroid Biochem. Mol. Biol., vol. 211, pp. 105904, 2021. (DOI)

Braniša, Jana; Jomová, Klaudia; Lapčík, Lubomír; Porubská, Mária: Testing of electron beam irradiated sheep wool for adsorption of Cr(III) and Co(II) of higher concentrations.. In: Polym. Test., vol. 99, pp. 107191, 2021. (DOI)

Zaoralová, Dagmar; Mach, Radim; Lazar, Petr; Medved', Miroslav; Otyepka, Michal: Single Atom Catalysts: Anchoring of Transition Metals to Graphene Derivatives as an Efficient Approach for Designing Single‐Atom Catalysts.. In: Adv. Mater. Interfaces, vol. 8, no. 8, pp. 2170041, 2021. (DOI)

Ženata, Ondřej; Panáček, Aleš; Kvítek, Libor; Vrzal, Radim: The impact of graphene oxide on androgen receptor signalling in prostate cancer cells.. In: CHEMOSPHERE, vol. 269, pp. 128759, 2021. (DOI)

Malina, Tomáš; Poláková, Kateřina; Skopalík, Josef; Milotová, Věra; Holá, Kateřina; Havrdová, Markéta; Tomanková, Kateřina; Cmiel, Vratislav; Sefc, Luděk; Zbořil, Radek: Carbon dots for in vivo fluorescence imaging of adipose tissue-derived mesenchymal stromal cells.. In: Carbon, vol. 174, pp. 771-771, 2021. (DOI)

Tantis, Iosif; Bakandritsos, Aristides; Zaoralová, Dagmar; Medved', Miroslav; Jakubec, Petr; Havláková, Jana; Zbořil, Radek; Otyepka, Michal: Covalently Interlinked Graphene Sheets with Sulfur‐Chains Enable Superior Lithium–Sulfur Battery Cathodes at Full‐Mass Level.. In: Adv. Funct. Mater., vol. ASAP, 2021. (DOI)

Gutten, Ondřej; Jurečka, Petr; Tehrani, Zahra Aliakbar; Budešínský, Miloš; Řezáč, Jan; Rulíšek, Lubomír: Conformational energies and equilibria of cyclic dinucleotides in vacuo and in solution: computational chemistry vs. NMR experiments dagger.. In: Phys. Chem. Chem. Phys., vol. 23, no. 12, pp. 7280-7294, 2021. (DOI)

Malá, Zuzana; Žárská, Ludmila; Bajgar, Robert; Bogdanová, Kateřina; Kolář, Milan; Panáček, Aleš; Binder, Svatopluk; Kolářová, Hana: The application of antimicrobial photodynamic inactivation on methicillin-resistant S. aureus and ESBL-producing K. pneumoniae using porphyrin photosensitizer in combination with silver nanoparticles.. In: Photodiagn. Photodyn. Ther., vol. 33, pp. 102140, 2021. (DOI)

Špičáková, Alena; Kraus, Petr; Gucký, Tomáš; Kryštof, Vladimír; Strnad, Miroslav; Bazgier, Václav; Otyepka, Michal; Kubíčková, Vendula; Poruba, Martin; Rácová, Zuzana; Zapletalová, Iveta; Anzenbacher, Pavel: in vitro and in silico Studies of Interaction of Synthetic 2,6,9-Trisubstituted Purine Kinase Inhibitors BPA-302, BP-21 and BP-117 With Liver Drug-Metabolizing Cytochromes P450.. In: Physiol. Res., vol. 69, no. 4, pp. S627-S636, 2021. (DOI)

Navrátil, Jan; Blonski, Piotr; Otyepka, Michal: Large Magnetic Anisotropy in OsIr Dimer Anchored in Defective Graphene. In: Nanotechnology, vol. 32, no. 23, pp. 230001, 2021. (DOI)

Lapčíková, Barbora; Lapčík, Lubomír; Valenta, Tomáš; Majar, Petr; Ondroušková, Kristýna: Effect of the rice flour particle size and variety type on water holding capacity and water diffusivity in aqueous dispersions.. In: LWT, vol. 142, pp. 111082, 2021. (DOI)

Osella, Silvio; Knippenberg, Stefan: The influence of lipid membranes on fluorescent probes' optical properties.. In: Biochim. Biophys. Acta, Biomembr., vol. 1863, no. 2, pp. 183494, 2021. (DOI)

Lo, Rabindranath; Lamanec, Maximilian; Wang, Weizhou; Manna, Debashree; Bakandritsos, Aristides; Dračínský, Martin; Zbořil, Radek; Nachtigallová, Dana; Hobza, Pavel: Structure-directed formation of the dative/covalent bonds in complexes with C70MIDLINE HORIZONTAL ELLIPSISpiperidine.. In: Phys. Chem. Chem. Phys., vol. 23, no. 7, pp. 4365-4375, 2021. (DOI)

Balouch, Martin; Šrejber, Martin; Šoltys, Marek; Janská, Petra; Štěpánek, František; Berka, Karel: In-silico screening of drug candidates for thermoresponsive liposome formulations. In: Mol. Syst. Des. Eng., vol. 6, pp. 368-380, 2021. (DOI)

Mistrik, Martin; Skrott, Zdeněk; Muller, Petr; Panáček, Aleš; Hochvaldová, Lucie; Chroma, Katarina; Buchtová, Tereza; Vandová, Veronika; Kvítek, Libor; Bártek, Jiří: Microthermal-induced subcellular-targeted protein damage in cells on plasmonic nanosilver-modified surfaces evokes a two-phase HSP-p97/VCP response. In: Nat. Commun., vol. 12, pp. 713, 2021. (DOI)

Langer, Michal; Paloncýová, Markéta; Medved', Miroslav; Pykal, Martin; Nachtigallová, Dana; Shi, Baimei; Aquino, Adélia J. A.; Lischka, Hans; Otyepka, Michal: Progress and challenges in understanding of photoluminescence properties of carbon dots based on theoretical computations.. In: Appl. Mater. Today, vol. 22, pp. 100924, 2021. (DOI)

Diachkov, Mikhail V.; Ferrer, Karoll; Oklešťková, Jana; Rarová, Lucie; Bazgier, Václav; Kvasnica, Miroslav: Synthesis and Biological Activity of Brassinosteroid Analogues with a Nitrogen-Containing Side Chain.. In: Int. J. Mol. Sci., vol. 22, no. 1, pp. 155, 2021. (DOI)

Kaszonyiová, M.; Rybnikář, F.; Lapčík, Lubomír; Vilčáková, J: The effect of long-term natural aging on the iPB-1 structure and the II – I phase transformation rate.. In: Polym. Degrad. Stab., vol. 183, pp. 109437, 2021. (DOI)

Sillitoe, Ian; Bordin, Nicola; Dawson, Natalie; Waman, Vaishali P; Ashford, Paul; ...,; Berka, Karel; Vařeková, Ivana Hutařová; Svobodová, Radka; Lees, Jon; Orengo, Christine A: CATH: increased structural coverage of functional space. In: Nucl Acids Res, vol. 49, pp. 266–273, 2021. (DOI)

2020

Lapčík, Lubomír; Vašina, Martin; Lapčíková, Barbora; Staněk, Michal; Ovsík, Martin; Murtaja, Yousef: Study of the material engineering properties of high-density poly(ethylene)/perlite nanocomposite materials. In: Nanotechnol. Rev., vol. 9, no. 1, pp. 1491–1499, 2020. (DOI)

Malá, Zuzana; Žárská, Ludmila; Bajgar, Robert; Bogdanová, Kateřina; Kolář, Milan; Panáček, Aleš; Binder, Svatopluk; Kolářová, Hana: The Application of Antimicrobial Photodynamic Inactivation on methicillin-resistant S. aureus and ESBL-producing K. pneumoniae using porphyrin photosensitizer in combination with silver nanoparticles. In: Photodiagn. Photodyn. Ther., vol. 33, pp. 102140, 2020. (DOI)

Sehnal, David; Svobodová, Radka; Berka, Karel; Rose, Alexandr S; Burley, S K; Velankar, Sameer; Koča, Jaroslav: High-performance macromolecular data delivery and visualization for the web. In: Acta Cryst D, vol. 76, no. 12, pp. D76, 2020, ISSN: 2059-7983. (DOI)

Porubská, Mária; Jomová, Klaudia; Lapčík, Ľubomír; Braniša, Jana: Radiation-modified wool for adsorption of redox metals and potentially for nanoparticles.. In: Nanotechnol. Rev., vol. 9, no. I, pp. 1017–1026, 2020. (DOI)

Lapčík, Lubomír; Vašina, Martin; Lapčíková, Barbora; Bureček, Adam; Hružík, Lumír: Effect of rapeseed oil on the rheological, mechanical and thermal properties of plastic lubricants.. In: Mech Time-Depend Mater, vol. 213, 2020. (DOI)

Han, Yanxiao; Langer, Michal; Medved', Miroslav; Otyepka, Michal; Kral, Petr: Stretch-Healable Molecular Nanofibers.. In: Adv. Theor. Simul., vol. 3, no. 10, pp. 2000094, 2020. (DOI)

Vermisoglou, Eleni; Panáček, David; Jayaramulu, Kolleboyina; Pykal, Martin; Frebort, Ivo; Kolář, Milan; Hajduch, Marian; Zbořil, Radek; Otyepka, Michal: Human virus detection with graphene-based materials.. In: Biosens. Bioelectron., vol. 166, pp. 112436, 2020. (DOI)

Kupka, Vojtěch; Dvořáková, Eva; Manakhov, Anton; Michlíček, Miroslav; josef Petrus,; Vojtová, Lucy; Zajíčková, Lenka: Well-Blended PCL/PEO Electrospun Nanofibers with Functional Properties Enhanced by Plasma Processing.. In: Polymers, vol. 12, no. 6, pp. 1403, 2020. (DOI)

Rautela, Ranjana; Scarfe, Samantha; Guay, Jean-Michel; Lazar, Petr; Pykal, Martin; Azimi, Saied; Grenapin, Cedric; Boddison-Chouinard, Justin; Halpin, Alexei; Wang, Weixiang; Andrzejewski, Lukasz; Plumadore, Ryan; Park, Jeongwon; Menard, Jean-Michel; Otyepka, Michal; Luican-Mayer, Adina: Mechanistic Insight into the Limiting Factors of Graphene-Based Environmental Sensors.. In: ACS Appl. Mater. Interfaces, vol. 12, no. 35, pp. 39764-39771, 2020. (DOI)

Shao, Xin; Aquino, Adelia J. A.; Otyepka, Michal; Nachtigallová, Dana; Lischka, Hans: Tuning the UV spectrum of PAHs by means of different N-doping types taking pyrene as paradigmatic example: categorization via valence bond theory and high-level computational approaches.. In: Phys. Chem. Chem. Phys., vol. 22, pp. 22003-22015, 2020. (DOI)

Torre, Bruno; Matěj, Adam; Sánchez-Grande, Ana; Cirera, Borja; Mallada, Benjamin; Rodríguez-Sánchez, Eider; Santos, José; Mendieta-Moreno, Jesus; Edalatmanesh, Shayan; Lauwaet, Koen; Otyepka, Michal; Medved', Miroslav; Buendía, Alvaro; Miranda, Rodolfo; Martín, Nazario; Jelínek, Pavel; Écija, David: Tailoring pi-conjugation and vibrational modes to steer on-surface synthesis of pentalene-bridged ladder polymers .. In: Nat. Commun., vol. 11, pp. 4567, 2020. (DOI)

Kubiasová, Karolina; Montesinos, Juan Carlos; Šamajová, Olga; Nisler, Jaroslav; Mik, Václav; Semerádová, Hana; Plíhalová, Lucie; Novák, Ondřej; Marhavý, Peter; Cavallari, Nicola; Zalabák, David; Berka, Karel; Doležal, Karel; Galuszka, Petr; Šamaj, Jozef; Strnad, Miroslav; Benková, Eva; Plíhal, Ondřej; Spíchal, Lukáš: Cytokinin fluoroprobe and receptor CRE1/AHK4 localize to both plasma membrane and endoplasmic reticulum. In: Nat Commun, vol. 11, pp. 4285, 2020. (DOI)

Langer, Michal; Paloncýová, Markéta; Medved', Miroslav; Otyepka, Michal: Molecular Fluorophores Self-Organize into C-Dot Seeds and Incorporate into C-Dot Structures.. In: J. Phys. Chem. Lett., vol. 11, no. 19, pp. 8252–8258, 2020. (DOI)

Berka, Pavel; Berka, Karel; Doležal, Pavel: Dextrans as Permeation Markers and Carriers for Oral Transmucosal Drug Delivery. In: Chem Listy, vol. 114, no. 8, pp. 552-558, 2020. (DOI)